# Difference between revisions of "R Hackathon 1/Diversification"

From Phyloinformatics

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Analyses of Diversification are currently (Dec. 13th 07) divided between several different packages in R: ape, apTreeshape, laser and geiger. | Analyses of Diversification are currently (Dec. 13th 07) divided between several different packages in R: ape, apTreeshape, laser and geiger. | ||

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+ | ==How do I make a lineage through time plot?== | ||

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+ | ==How do I calculate topological measures of diversification?== | ||

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+ | ==How do I calculate shifts in diversification rate?== | ||

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+ | ==How do I calculate rates of diversification?== | ||

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+ | ==How do I fit a simple birth-death model when I only have extant species?== |

## Revision as of 13:02, 13 December 2007

Analyses of Diversification are currently (Dec. 13th 07) divided between several different packages in R: ape, apTreeshape, laser and geiger.