Project Plan for NeXML and RDF API in BioRuby

From Phyloinformatics
Revision as of 00:12, 26 May 2010 by Yeban (talk)
Jump to: navigation, search

Week 1

Development of the NeXML parser.

  • Design classes to encapsulate:
    • Taxa( otu )
    • Taxa block( otus ) and
    • Sets( class )
  • Parse otu, otus and class and return objects of the corresponding class.

Week 2

  • Design classes to encapsulate:
    • Trees( trees )
    • Tree( tree ), Network( network ), Node( node ) and Edge( edge )
  • Parse trees, tree, node, edge and return objects of the corresponding class.

Week 3

  • Design classes to encapsulate:
    • Character block( characters )

Week 4

Week 5

Week 6

Week 7

Week 8

Week 9

Week 10

Week 11

Week 12

A discussion on API can be found here - NeXML and RDF API for BioRuby